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This is a website about me and my interests, acting as a portfolio where you can take a look at my resumé. I have also compiled som pages about various topics, mostly bioinformatics and use of Python for solving bioinformatic problems, which you can find in the section "Bioinformatics", which also describes my education.
Being a scout, there is also a small section about Scouting.
Latest news!
For the conference in Hinxton, I will be preseting a poster titled "Using KEGG pathway information for genomic partitioning". The poster, together with a supplement can be downloaded from the Conferences-page.
More news...
There were some serious bugs in AnnotationFuncs v. 1.1.0 and it caused a lot of problems on BioConductors repository. I have therefore been busy fixing the problems while implementing a new set of awesome functions.
These have been included in v. 1.3.0 and gives a faster retreival for using the INPARANOID homology data packages. In a quick test on hom.Hs.inp.db, speed was reduced from 11 minutes to approx. 20 seconds!
Go to AnnotationFuncs.
Adding a new and powerful function, I have bumped AnnotationFuncs from 1.0 to 1.1. It will be available through BioConductor in the next release, sometime in the fall. Untill then, you can get it from its webpage. However, it is recommended always to use the BioConductor repository for your package retrieval!
Go to the AnnotationFuncs.
Trying to map between different annotations in R? Are you using the annotations packages from BioConductor such as org.Bt.eg.db?
Then try this package which contains some functions for mapping between several annotations with just a single line of code!